Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SPIKVVGAKKELPFCNLDLLACVQPFLVNGHGGKLPKGCCEKMKK-----------STSCMCRFLTAKEQ-NLN-AAAHRIFWFCHISVPNCPKI
1SIY Chain:A ((8-78))
----------------GNLAQCIG-FLQKG-G-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIP-----
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42344 for 371 contacts (-114.1/contact) +
2D Compatibility (PS) -5840 + (NN) -1372 + (LL) 668
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -52538.0 ( -141.61 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: