Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGI-AIYNETQIIFTDSPGIFSAETK--LEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTR-LRHTKTKCIFVINKIDLVKKPELKMTYKHLDLLYK----LKKIFTISALKSDGLSDL----MDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFE--EKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV |
| 3IEV Chain:A ((9-299)) | ----KVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWR--PRDEEIYQNFIKPLNKPVIVVINKIDKIGP--AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFP----EDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166296 for 2132 contacts (-78.0/contact) +
2D Compatibility (PS) -30484 + (NN) -9993 + (LL) 792
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -236231.0 ( -110.80 by residue)
QMean score : 0.539
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