Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILS-------PILL-------LLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENYEI-W----GWRLLFYFCSIMGVIGFLTRYIMEES----LAYKTHDQ-----NKSLSNSPFLELIRSYKKAF------------------MIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVRITVEITFGTSAVLFAILSDKVGRKNVMVLILIALACAGLPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVC-----ELLPTKVRCTGFSLAHNISAGIFGGISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 4GC0 Chain:A ((70-411)) | ----------------------------------------------IGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSA----WPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV-GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQ----LLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV---AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166534 for 2103 contacts (-79.2/contact) +
2D Compatibility (PS) -29633 + (NN) -1748 + (LL) 3732
1D Compatibility (HY) -23200 + (ID) 3750
Total energy: -221133.0 ( -105.15 by residue)
QMean score : 0.170
|
|
|