Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
4ZSZ Chain:A ((2-65))
-----------------------------VKYEELLKTLENGIN--SEEGEIRLVRKSQGRFKEEFNFDLSLGSKPLLTLKVFLGRKPYWQPWVEVFGVNPNLRNVFFG
General information:
TITO was launched using:
RESULT:
Template:
4ZSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17575 for 358 contacts (49.1/contact) +
2D Compatibility (PS) -6406 + (NN) 2800 + (LL) 2388
1D Compatibility (HY) -2400 + (ID) 950
Total energy: 13007.0 ( 36.33 by residue)
QMean score : -0.093
(partial model without unconserved sides chains):
PDB file :
Tito_4ZSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZSZ-query.scw
PDB file :
Tito_Scwrl_4ZSZ.pdb
: