Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTDYNINLTDSALKKIHSLVEQEEDKSSILRVAVSGGGCSGFKYNFLMDQIDKNLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMVDNCSVKFLNNSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV
1R95 Chain:A ((2-97))
-----SITLSDSAAARVNTFLANR-GKGFGLRLGVRTSGCSGMAYVL------------------EFVDEPTPED-----------------IVFEDKGVK--VVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKD----------
General information:
TITO was launched using:
RESULT:
Template:
1R95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28910 for 624 contacts (-46.3/contact) +
2D Compatibility (PS) -10456 + (NN) -6390 + (LL) 1400
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -54006.0 ( -86.55 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1R95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R95-query.scw
PDB file :
Tito_Scwrl_1R95.pdb
: