Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQ---LKKQLKQKLGV
4DVY Chain:P ((582-637))
---------FLSSNKELAGKALNFNKAVAEAKSTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLES
General information:
TITO was launched using:
RESULT:
Template:
4DVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10342 for 266 contacts (38.9/contact) +
2D Compatibility (PS) -5801 + (NN) -3480 + (LL) 1268
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -71.0 ( -0.27 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_4DVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DVY-query.scw
PDB file :
Tito_Scwrl_4DVY.pdb
: