Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLPSTNILDTQLTDVTTAPVVKLNILIITSNSTVVPVDVELGNLLCLQVMQARNISDGIMWGYTGAVILHVI
1KB0 Chain:A ((71-106))
-------------------ATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW
General information:
TITO was launched using:
RESULT:
Template:
1KB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20574 for 176 contacts (-116.9/contact) +
2D Compatibility (PS) -4035 + (NN) 343 + (LL) 1452
1D Compatibility (HY) 0 + (ID) 500
Total energy: -23314.0 ( -132.47 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1KB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KB0-query.scw
PDB file :
Tito_Scwrl_1KB0.pdb
: