Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
3Q6J Chain:A ((396-456))
------EVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDA
General information:
TITO was launched using:
RESULT:
Template:
3Q6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3641 for 317 contacts (-11.5/contact) +
2D Compatibility (PS) -6091 + (NN) 2044 + (LL) 912
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -9876.0 ( -31.15 by residue)
QMean score : -0.005
(partial model without unconserved sides chains):
PDB file :
Tito_3Q6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q6J-query.scw
PDB file :
Tito_Scwrl_3Q6J.pdb
: