Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEEKIPKNKQEQLGQPKIPVSSQVSNTQNNNQQPNLQSENGSKLPIAAASMLAITGIAFRGSYCSLPRNVSSRNSNRGLLSCCYYNPISL
1OFD Chain:A ((94-129))
--EEVVRLEKLTVLGWREVPVNSDVLGIQAKNNQPHIEQILVTCPEGCAGDELDRRLYIARSIIGKKLAEDFYVCSFSCRTIVYKGMVRSI
General information:
TITO was launched using:
RESULT:
Template:
1OFD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8204 for 138 contacts (59.4/contact) +
2D Compatibility (PS) -3744 + (NN) -2497 + (LL) 272
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -815.0 ( -5.91 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1OFD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFD-query.scw
PDB file :
Tito_Scwrl_1OFD.pdb
: