Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKSDILCKRVIGIVGSGQLGKMTAIAATKLGQETHIFANAKDDPACSVANNLTIADFSDKKALESFAQSVSLVTIESENIPCDAIDIMSQYVDFYPGKRALHISQNRLREKDFIRNLGIRTADYKSIQDHNDLLEVTRAFGYPTRLKTTEMGYDGKGQYMIGNDSQVERFASFDWNAQYILEASVDLLKEVSIVVTRDKNGKVAFFPVAENHHVDGILDTSIVPAKVDSKLVQEIQQTAEKIADALDVVGILAIEFFITKNSELLVNELAPRPHNSCHWSLDACNVSQFEQLIRVICKLPMQEVVLRFPCMTKNIIGNDVYNTYKYLSDKRA-NLTIYGKKEVRGRRKMGHVNIDLS |
4DLK Chain:A ((18-354)) | ------------------QLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAYLPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAENIHVNNILHESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNLPLGETNLLKPVVMVNILGEHIEGVLRQVNRLTGCYLHLYGKEEAKAQRKMGHVNILND |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156519 for 2784 contacts (-56.2/contact) +
2D Compatibility (PS) -36685 + (NN) -9259 + (LL) 988
1D Compatibility (HY) -23200 + (ID) 6750
Total energy: -231425.0 ( -83.13 by residue)
QMean score : 0.446
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