Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEPRVHLSMDDSGKKINLDIAPENCSATKDGFLCIDKNEQDYKLKILIKKS
3MMR Chain:A ((346-402))
---------------------------------------NYREINLLMKILAETKRVVSMDLVEYNP----SLDEVDKKVHGDSLPILDNATKTGKLCLELIARVLGYDIV----
General information:
TITO was launched using:
RESULT:
Template:
3MMR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18614 for 273 contacts (68.2/contact) +
2D Compatibility (PS) -5885 + (NN) -1802 + (LL) 2152
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 10079.0 ( 36.92 by residue)
QMean score : 0.027
(partial model without unconserved sides chains):
PDB file :
Tito_3MMR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MMR-query.scw
PDB file :
Tito_Scwrl_3MMR.pdb
: