Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLKLPEVTVNWSYPVLNFDLSFRIILISFLSVAFL-IVLPAKNFS-----FSEMLSFFAYTISSLCAILSKQIISVIIFCELMAISASFIIAAGCK--DN-GPAIRYACVHFFVGIILTAGLAIQN-----------------------------PNLIIMGLLIICACFPFSFWVVDAYPAASLHGASYLSLFTTKISFLIALLHTYNLWQ-DH-AEILAFLGTITAIYGIIFTSLEQNIRRFLAYNVVGQMGILIMTGSLLSHSKNAIPLLILNIIFSIVYQLLLTAVANSIILRT-KAVNFNRVG---KFMSAEGIYALIAILTMAAFPG-TAGFISKSYIAVEIKMNGTNLELYKNLHKILNLSLYLSVGLKFLYYIFITKSRSK-L-LAEKGGGVAMIILASICVIAGNPYL-PIYNK-PSI--FNL-AYNTKNIWSQLNLLLCVTLLFIPLRKLF------------L---PRINLKMDIDWIFRALIPYVVSLFNKLIFKMRKISAGALQNLTNSLTNLYFNNANKLKEALSYDSVSFISASSLFLMSILLVLLCLNH |
| 3RKO Chain:L ((74-596)) | ------------NIGFN-LVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQA-----WDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMV--AGLVGAFMT-SLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAW---LLKRDPLNSMMNIPAVLSRFAGK---GLLLSENGYLRWYVASMSIGAVVVLALLMVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -515689 for 3980 contacts (-129.6/contact) +
2D Compatibility (PS) -46728 + (NN) -16893 + (LL) 2636
1D Compatibility (HY) -28000 + (ID) 3500
Total energy: -608174.0 ( -152.81 by residue)
QMean score : 0.311
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