Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRRGRIRPENSARELRLRQNRRNTGRMMMKEVTEGLRQFELKSEIERREREPETFEDGTRKLLMGLT
3HOP Chain:A ((88-143))
------------SQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLI
General information:
TITO was launched using:
RESULT:
Template:
3HOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17353 for 323 contacts (53.7/contact) +
2D Compatibility (PS) -5847 + (NN) 338 + (LL) 600
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 10494.0 ( 32.49 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_3HOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HOP-query.scw
PDB file :
Tito_Scwrl_3HOP.pdb
: