Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWLLVSILSIIFVLLILSFLFSGAEIGLTSVSRSRVNKLKLDGNKRAKIIDHLLNKKELTIGTILLGNTIINITCSVLFTAIFINLFGNESVFLSTIVMTFCILLFCEVLPKTYAMQNPEKFTSFSAYFVLFFVKIFSPLTLGIQFIVNFILKLCGFHKNREAISAADAMRNMIALHRSEGTMLQQDLDMLSSILDLAETEISEIMTHRRNLFSLDIDRNKEELIKEILTSSH-SRVPLWQKELDNIVGVVHVKNLINALREKDNKIEEVDIAQVMSKPCFLPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKMSDNVYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPDEGEEFSMFGFYFRILKKDKNIITVIEVQVKTDNTVTAID |
| 3LV9 Chain:A ((18-147)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEFEEKKIREIMVPRTDMVCI-YESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ-KINENKIE---LEEILRDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68354 for 915 contacts (-74.7/contact) +
2D Compatibility (PS) -13674 + (NN) -2285 + (LL) 24928
1D Compatibility (HY) -16400 + (ID) 2500
Total energy: -78285.0 ( -85.56 by residue)
QMean score : 0.548
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