Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTN-MVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDW-----QGDKPEILVDRVVGNVHNGAIILFHDHDNKSNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 1W17 Chain:A ((60-251)) | -------------------------------------------------LGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHFV-KDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQKGKK--YAYDHMIKQAHPGAIYLL--HTVSRDNAEALDDAITDLKKQGYTFKSIDDLMFEKEMR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74561 for 1516 contacts (-49.2/contact) +
2D Compatibility (PS) -20147 + (NN) -11054 + (LL) 3556
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -116356.0 ( -76.75 by residue)
QMean score : 0.442
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