Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPENISVVANL--PLIERLKCLEDIQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCLEGKALVCLGFKTSNKE-YGRLIIENGSLREIVETQDDENSDEEFL--ANAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVGYV-TTDEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPE------TVFFSLDTQIGMDSIIYPYVFFGPGVRIGPG-----------AKIGPFTKCEDTTIGDGAI------------------VGNFVEAKASDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK |
| 2V0L Chain:A ((9-443)) | --VILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANEQVNWVLQTEQLGTAHAVQQAAPFFK---DNENIVVLYGDAPLITKETLEKLIEAKPENGIALLTVNLDNPTGYGRIIRENGNVVAIVE-QKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVGENELVITRVAQRHIQGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253643 for 3019 contacts (-84.0/contact) +
2D Compatibility (PS) -42811 + (NN) -13105 + (LL) 644
1D Compatibility (HY) -30000 + (ID) 7850
Total energy: -346765.0 ( -114.86 by residue)
QMean score : 0.445
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