Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGVHITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRKQKDPINK----VVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLD-------GEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
4A2A Chain:A ((189-390)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEEE-IQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAK---IPGGVVLTGGGAKIPRINELATEVFKSPVRTGC---YANSDRPSIINADEVANDPSFAAAFGNVFA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106600 for 1479 contacts (-72.1/contact) +
2D Compatibility (PS) -19608 + (NN) -6096 + (LL) 15448
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -130056.0 ( -87.94 by residue)
QMean score : 0.461
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