Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLASLPEGHTIIGLQFENLMLNNRKSIPNILGIDEIISENLFFQRKTGNSAIYQIDYIIRTKFNTLYICEIKFSKNRIGHSIM
1V8B Chain:A ((302-339))
------------------------------NVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELF
General information:
TITO was launched using:
RESULT:
Template:
1V8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11754 for 179 contacts (-65.7/contact) +
2D Compatibility (PS) -3809 + (NN) 699 + (LL) 1856
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -17558.0 ( -98.09 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_1V8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V8B-query.scw
PDB file :
Tito_Scwrl_1V8B.pdb
: