Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSIYVTLSISLVLILLQVTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLITPKLTVHNVYMQCNNNKEQKLSTLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSNRENFINIINAKTSSNAVDIVIKGSQVSLNNNFTD--YDNIVNIEKVAIGKSKQFSGEIRVDSNDYDFSGKVNITKKNVHISVESN-FINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKITNLSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQNDRKSNHTNINISFSKVNLDSIRNSSRRIIDIKDLLECFRKVVPRNLSLDFNIEASNIQYQNKILDKSHAILKFADGEIKVDMLLKFPGTNNVSHLSGKVSNSGTLSEFNGNLLVKGDNFKSFISCFFPSIKIKGNQKNQFTLSSELHFAPRILSISNIRFLNDKEFLQGSIKVSHTKKHNVVGGRFSVHNLDADKYDYSLFSSLSKMGWLKNLRYDVSIKINANDFKLNDTKIKDLDFLLKMEKGKLVVDKINLSGEDCDINGSTKILVDQRYTKPLLEVNLTGNKFNGDIFKLPSFIEVKRDSRNKINQIQWSTKQFDFLDNKESFDANVQINAIEFRVGQNVLKDFNLDAVVRNNTVTMRQVSYALEHGQVFFQGYLRSDSMYTKFLITNLDAKGIGKAIGIDNVDGRISLNGEIKAQGKSFHGWANNLSGEINLQAQEIEFTNVDFNSFITNLLNGKNKSEISTLAHDDIYNGSTLFENVIGKANIKNGVCSTSLQFRIDQASGSISSNLTLPNFALISLVRFFFILPGHSSPIYIDMHLDGPIWHPKMNFDVDQIFSTLKRIRSIKFIFAK |
2LKF Chain:A ((20-162)) | ----------------------------------------------------------------------------------------------------------------------------KTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK-ATGNIN--SGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQ------------------NEEFQVQNT--LGYTFGGD-ISISNGL-LNGNTAFSETINYKQESYRTT----LSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17036 for 755 contacts (22.6/contact) +
2D Compatibility (PS) -14499 + (NN) -488 + (LL) 36780
1D Compatibility (HY) -4000 + (ID) 2400
Total energy: 32429.0 ( 42.95 by residue)
QMean score : 0.282
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