Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKEYVDDIYNAGTHLLALINDVLDFSKAESSSLTVEKVKFNLNKIIDSCLNMLSPKLKETGISL--EKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDG---LIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSGYRNEGTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
| 2C2A Chain:A ((11-239)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYN-SLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPC-PVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVE--DNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74620 for 1419 contacts (-52.6/contact) +
2D Compatibility (PS) -22559 + (NN) -2199 + (LL) 21328
1D Compatibility (HY) -18400 + (ID) 3850
Total energy: -100300.0 ( -70.68 by residue)
QMean score : 0.378
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