Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDTVITEEIIEHAKYYVKHKSHISEYPGGLESEKQVLTKILGFLEGKFNNMQLDSDLVDKPATLNQAVDEADDEQLQSPEPKSADGC
3ZCB Chain:B ((1-56))
-----VLSEEEIEYRRRDARN-ALASQRLGGLEPDPQVVAQMERVVVGELETSDVIKDLMERIKREEI---------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZCB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5891 for 311 contacts (-18.9/contact) +
2D Compatibility (PS) -5897 + (NN) -2014 + (LL) 1228
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -15324.0 ( -49.27 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3ZCB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZCB-query.scw
PDB file :
Tito_Scwrl_3ZCB.pdb
: