Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPEKMINLCYNSADSVSVEYSDVIVVKNLDPEQLEQYKSSSKLEFTLKFQNGKVEYKNSKVTLTIPEQLKNCKANGKSLLGDINEHFKDTDNEVVECL--VDK-IADGLKSFIINPEDLNVDGSSIINKDDDAPVQILDSTEYGGTTEEQLLIQGIVNNVVGTLAGIVEVPIGMATDWVWPQDQK |
1XAI Chain:A ((177-220)) | -------------------------------------------------------------------AEVYKHALLNGESATQDIEQHFK--DREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDISHYIQYLIQLGYP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2230 for 207 contacts (-10.8/contact) +
2D Compatibility (PS) -4375 + (NN) -1876 + (LL) 4840
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -6541.0 ( -31.60 by residue)
QMean score : 0.539
|
|
|