Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSGSQHLFDIIILLSAAVFIVIAFWKMNISPVLGYFVAGALIGSHGFNLIHSAKAMDNFAEFGVVFLLFIIGLELTFERLIAMRIHVFGFGSLQVIVTMVAIWCIALAFGVNTNMAAVIGGGLALSSTAIVLQVLQEKGSQASQVGRLSIAVLLMQDFAVVPLIVLVPLLTGNSENSLISSLTGSLLQAAIALVMIFITGRLLLRPLFSIIARMESNEVFISTTLLIILGAAFITEQFRLSMALGAFVAGLLVAETEHRHSVEHAVLPFKDLLLGLFFMTVGMSINIDLLLNKLPLITLLSIILIVLKTSIIYMLCRFFGFKRAPAIQAGLLLAQGGEFAFILFRLADELNVLPSEIAQVLMMVTTVTMAFTPLLSGLGDWIVNSFSTEKVILDDEAVETDTQDLYNHVIVAGFGRVGYMVTKMLTAEHLSYVVVDIQSKIVKEGKSDSFPIYL-GDATRYEILKSVGIGRAQALVISIKNEVTIKKIVSLVATNFPHVNIIIRLPDLSNAEVYKDLGASKII-PETSEMGLQLGGAALSLSGISESGVASLKSKFRKGNYSMIKDISSDMDE |
1LSS Chain:A ((6-123)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDAD-MYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIER---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92678 for 952 contacts (-97.4/contact) +
2D Compatibility (PS) -12715 + (NN) -8031 + (LL) 40152
1D Compatibility (HY) -10800 + (ID) 1650
Total energy: -85722.0 ( -90.04 by residue)
QMean score : 0.552
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