Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEACKTCEESQRELERELENLESQLSAVEKEKEDLENESAELQKQVQTLKEDKKMCKKD
4CGK Chain:A ((48-87))
-----------QQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLE---------
General information:
TITO was launched using:
RESULT:
Template:
4CGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9713 for 153 contacts (63.5/contact) +
2D Compatibility (PS) -4750 + (NN) -4949 + (LL) 1440
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -1096.0 ( -7.16 by residue)
QMean score : 0.847
(partial model without unconserved sides chains):
PDB file :
Tito_4CGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CGK-query.scw
PDB file :
Tito_Scwrl_4CGK.pdb
: