Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKV-GEKDFRYDNPIVEFVNSELKISNKYNTVMRAVNLLLRHA------PVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLWK--IDRPILNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNIVLAKPKKKFLSTPEVFSKYGGNFSKPIEWRDDTEKDLLKLLK-ETENDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
| 1OJ4 Chain:A ((7-264)) | -------SPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVE-------GVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDP---PEKWYLVAHPGVSIPTPVI-------FKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREV-DAVLSWLLEYAP--SRLTGTGACVFAEFDTESEAR----QVLEQAPEWLNGFVAKGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79292 for 2044 contacts (-38.8/contact) +
2D Compatibility (PS) -27151 + (NN) -7772 + (LL) 2416
1D Compatibility (HY) -16400 + (ID) 4000
Total energy: -132199.0 ( -64.68 by residue)
QMean score : 0.444
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