Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSNVKLLEARLKAEYYTVIVAHDSEEAIDLVAKQQPDIILLDIMMPKINGFKVCKNLKSTPLTTHIPIIMVTALHDTHDRVQGINAGADDFLTKPIDETALSARIKSLTRLKMVIDELRLRGETNAEICGVAGSSIMDYSNQIFDSNILVVDEDIFQAEQIHNVLKQRFKL-INILNDPMEALKVGIEDNYDLIISDMQFSETDGLRLCSEFRSKVETRYTPILILSEDYNKNNLVK--ALDVGANDYLTVPLDESELIARVNLQVK---------------RKRYQDALRMNLFNNAEMSIKDPLTNCYNRRYFDTHLRNIIKDSVEKNRRLSLMILDIDYFKIVNDDFGHSAGDELLKQIQKRISENI-RVTDLLARFGGEEFVVVMPDTNISDAYIVAERIREIIATE--PFILSDKNTTHNVTVSIGVVEMQESDLDNIEKFIVRADRYLYKAKNSGRNRVVTS |
| 3I5A Chain:A ((19-334)) | ----------------------------------------------------------------------------------------------------------------------------------------------------VLLVDDQAMIGEAVRRGLAGHESIDFHFCADPHQAIAQAVQIKPTVILQDLVMPGLDGLTLVREYRSNPLTRDIPIIVLST--KEDPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMN-SDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCSRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHIAPVPGSS--LTVSIGVATVTPQVGQHSRQLILDADKGLYLAKNNGRNQVAAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168716 for 2266 contacts (-74.5/contact) +
2D Compatibility (PS) -32302 + (NN) -17100 + (LL) 11228
1D Compatibility (HY) -18800 + (ID) 5500
Total energy: -231190.0 ( -102.03 by residue)
QMean score : 0.514
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