Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSVSIMDLIPIQRGPKNWLKDKGEEILNLVRNYKKISDQKLRKIFYLLIKSAQLSKKSSRKVEIIEIAKNLFKAGISINIISQITGLSTDRIA
3S4Z Chain:A ((761-782))
-----------------NFSKSKFEEILSLFTCYKKFSDILKVSDSLLSLKFVSDLLTALFRDSIQSHEESLSVLRSSGEFMHYAVNVTLQKIQ
General information:
TITO was launched using:
RESULT:
Template:
3S4Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3750 for 83 contacts (45.2/contact) +
2D Compatibility (PS) -2305 + (NN) -1521 + (LL) 1272
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -1854.0 ( -22.34 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_3S4Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S4Z-query.scw
PDB file :
Tito_Scwrl_3S4Z.pdb
: