Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLINPKVSAMFFDQIVTATDHNIAWEKIQNLLYNLYGEATYNSWLSSLKFVSSSNGEVLLSVPTRFIKEWITVHYMEKILLLWQNEDKSICSIDIQVTEEKNSSSSIISKNKEESVNNLGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPIPGSNPLFLYGGVGLGKTHLMHAIAWHIVNSPSAKR--KVVYLSAEKFMYQYITALRSKDIMLFKEQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNALIDQNKQLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRLGILQAKVEQMNMYVPQDVLEFLARNIRSNIRELEGALNKVAHTSLIGRSMTVESASETLMDLLRSNHRSITIAEIQKKIAEFFNIKVTDMHSNRRLRSLVRPRQIAMYFAKKFTHKSLPDIGRSFGGRDHATVIHAVKQIENFIKTDSEFADEINQLRKMFK
1L8Q Chain:A ((4-317))---------------------------------------------------------------------------------------------------------------------------LNPKYTLENFIVGEGNRLAYEVVKEALENLGSL--YNPIFIYGSVGTGKTHLLQA-----AGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK-NVREIEGKIKLIKLKGFEG----LERKERKERDKL---------MQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKK--RKFKHLVGFLEKQAF


General information:
TITO was launched using:
RESULT:

Template: 1L8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183118 for 2363 contacts (-77.5/contact) +
2D Compatibility (PS) -34404 + (NN) -19152 + (LL) 10052
1D Compatibility (HY) -27200 + (ID) 5850
Total energy: -259672.0 ( -109.89 by residue)
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_1L8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L8Q-query.scw
PDB file : Tito_Scwrl_1L8Q.pdb: