Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNT-CPVAYVDGKG-------------------VEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILP-EKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDILLQSSFLFVRGNHENCDRAY----EGWFRYLDSHPFS--SEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLT--QDS----SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKF-PNNVATIVSGHIHIAQILLMN------------------NVPDQIIVGNGGALLHAQD-Q-EPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNH---EFTFYDQ-NNEE--MYSAKLTEDFKLEIN |
2QFP Chain:A ((18-420)) | -------------------APQQVHITQGD-LVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSN----------TTLSHY--ELSPKKGQTVLFVGDLSYADRYPNH-------DNVRWDT----WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEAS-QSTSPFWYSIKRASAHIIVLSSYSAY---------GRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFM-----EGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPE-----------YSA---FREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91593 for 2998 contacts (-30.6/contact) +
2D Compatibility (PS) -36661 + (NN) -10641 + (LL) 4772
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -139723.0 ( -46.61 by residue)
QMean score : 0.314
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