Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
4GMR Chain:A ((49-123))
---HKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQG
General information:
TITO was launched using:
RESULT:
Template:
4GMR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33113 for 570 contacts (-58.1/contact) +
2D Compatibility (PS) -8135 + (NN) -4783 + (LL) 444
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -50387.0 ( -88.40 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_4GMR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GMR-query.scw
PDB file :
Tito_Scwrl_4GMR.pdb
: