Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
4YG1 Chain:A ((20-70))
-------------------------VRQQNGWTQSELAKKIGIKQATISNFENNP-DNTTLTTFFKILQSLELSMTLCD--------------------
General information:
TITO was launched using:
RESULT:
Template:
4YG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13470 for 301 contacts (-44.8/contact) +
2D Compatibility (PS) -5610 + (NN) -2787 + (LL) 3788
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -23629.0 ( -78.50 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4YG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YG1-query.scw
PDB file :
Tito_Scwrl_4YG1.pdb
: