Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
2LC4 Chain:A ((33-64))
-------MVGTLSNAQGTFALVKGAG---GVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGNWLERPRSLTLKERSLEHHHHHH------
General information:
TITO was launched using:
RESULT:
Template:
2LC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16209 for 144 contacts (-112.6/contact) +
2D Compatibility (PS) -3484 + (NN) -2711 + (LL) 1796
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -22058.0 ( -153.18 by residue)
QMean score : -0.031
(partial model without unconserved sides chains):
PDB file :
Tito_2LC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LC4-query.scw
PDB file :
Tito_Scwrl_2LC4.pdb
: