Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKLTENKKPLVDKEDKKTPPVKGFTKKNKSRRDFITLTTCAMASIGTVSGLWPLIKSMNPSAEVLAMSTVEVNLSGIQEGHGIKVKWQGKPVFIRRRTKQEIKAARVVNVEDLRDPQSDEQRVHKGKD-EWLIMVGVCTHLGCVPVEHATKDGNGWFCPCHGSYYDTSGRVIGGPAPKNMVVPDYFFPNENVVVIGKKA
1KYO Chain:E ((21-184))----------------------------KGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRV---KDPQWLIMLGICTHLGCVPIGEA-GDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG----


General information:
TITO was launched using:
RESULT:

Template: 1KYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49552 for 1071 contacts (-46.3/contact) +
2D Compatibility (PS) -17590 + (NN) -5297 + (LL) 1260
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -91079.0 ( -85.04 by residue)
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_1KYO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KYO-query.scw
PDB file : Tito_Scwrl_1KYO.pdb: