Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
1XHJ Chain:A ((10-77))
----------------------------------------------------------------------------------------------------------------------DQVAEVIER-LRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF
General information:
TITO was launched using:
RESULT:
Template:
1XHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23760 for 362 contacts (-65.6/contact) +
2D Compatibility (PS) -7491 + (NN) -4688 + (LL) 7336
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -36753.0 ( -101.53 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1XHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XHJ-query.scw
PDB file :
Tito_Scwrl_1XHJ.pdb
: