Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRY--NTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRGREIGFPTINIPI-EDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
| 1MRZ Chain:A ((2-284)) | ---------------VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGL-LMTVESRVEMLSRYA--RTVVLDF------FRIKDLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRKK----GVEVYEIEDVVVQGKRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIV-----------FPTANIDRGNEKLVDLKRGVYLVRVHL-----------------------PDGKKK-----------FGVMNVGFR------RNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKK----EELKAAIDQDVKSARNMIDDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177774 for 1971 contacts (-90.2/contact) +
2D Compatibility (PS) -28068 + (NN) -6757 + (LL) 3728
1D Compatibility (HY) -25200 + (ID) 4350
Total energy: -238421.0 ( -120.96 by residue)
QMean score : 0.526
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