Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIVTRFAPSPTGFLHIGGARTALFNWLYAKHHGGRFLLRIEDTDRKRSTQEAIDAIINGLKWLGVSYD------GEI--VYQSKRIERHIEVANLLVEKGKAYCCCCPEDKVAEKKAKAREERKIYKHKCTSVIPDAKPVVRFNVPDSQEIIVDDKIYGHIKVNSDQLDDMVILRSDNTPTYIFAVVVDDHDAGITDIIRGSDHLTNTFKQVLIYQALDFDIPRFAHVPLIHGRDGNKLSKRHGATSVCDYEKMGILPKAMRNYLLRLGWSHGNDEIISNEQAVKWFNLESIGRSPARLNFKKLEHLNNHYINNMSNEDILTLMLGESTLTNKK-----KNYLLQGLTELKKRANYLTELLDLAQFYIKD---------PPFDLSEEAEQVVKSNLDIIKLLASFLSNIGDKNWNKGFLSSQVKEFSKLHSAKISDIYHSLRAPITGVMDAPGIIDIMIILGKDECIRRLQAV |
| 3AFH Chain:A ((26-479)) | ---VRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFTTYEYPHEYKEKGHPV------TIKFKVLPGK-TSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSFDPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTLSQLYDIMYPFMNDDYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNS---------WNMEEIEKTLRDLSEKGLASKKVVFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233166 for 3374 contacts (-69.1/contact) +
2D Compatibility (PS) -45493 + (NN) -14464 + (LL) 288
1D Compatibility (HY) -32800 + (ID) 7950
Total energy: -333585.0 ( -98.87 by residue)
QMean score : 0.543
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