Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDNLKQLYDEIEKLDEFKEGSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLNLVHDCELEELQNVMNTNFTANWYLLKNLDPVLKKSNSGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTKLCVNAVYSEGPVDSEMYKQAFPG------------KDISELILPNKLTDKFVELASEDCS-ISGQVLPLSKSLE
3TOX Chain:A ((4-247))---------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG----EAAALAGDVGD----EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT-AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGG-TDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGAS


General information:
TITO was launched using:
RESULT:

Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167612 for 2046 contacts (-81.9/contact) +
2D Compatibility (PS) -24848 + (NN) -8587 + (LL) 916
1D Compatibility (HY) -5600 + (ID) 3500
Total energy: -209231.0 ( -102.26 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3TOX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TOX-query.scw
PDB file : Tito_Scwrl_3TOX.pdb: