Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDNLKQLYDEIEKLDEFKEGSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLNLVHDCELEELQNVMNTNFTANWYLLKNLDPVLKKSNSGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTKLCVNAVYSEGPVDSEMYKQAFPG------------KDISELILPNKLTDKFVELASEDCS-ISGQVLPLSKSLE |
3TOX Chain:A ((4-247)) | ---------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG----EAAALAGDVGD----EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT-AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGG-TDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167612 for 2046 contacts (-81.9/contact) +
2D Compatibility (PS) -24848 + (NN) -8587 + (LL) 916
1D Compatibility (HY) -5600 + (ID) 3500
Total energy: -209231.0 ( -102.26 by residue)
QMean score : 0.494
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