Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSK----FKSPLPEGKKSEILKLVEQNKEVFISGKTLYKAFTDVGQSVDD
1K8W Chain:A ((102-160))
-------SDADGQIVEERPV-TFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGN
General information:
TITO was launched using:
RESULT:
Template:
1K8W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6935 for 223 contacts (31.1/contact) +
2D Compatibility (PS) -5840 + (NN) -3154 + (LL) 996
1D Compatibility (HY) -400 + (ID) 350
Total energy: -1813.0 ( -8.13 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_1K8W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K8W-query.scw
PDB file :
Tito_Scwrl_1K8W.pdb
: