Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGY--TDEQITSEL--RNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
3I5Y Chain:A ((273-355))
--------------------TLDDKV-----QKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKI
General information:
TITO was launched using:
RESULT:
Template:
3I5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4600 for 296 contacts (15.5/contact) +
2D Compatibility (PS) -8312 + (NN) 720 + (LL) 2620
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -7122.0 ( -24.06 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_3I5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I5Y-query.scw
PDB file :
Tito_Scwrl_3I5Y.pdb
: