Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGN----LGVP--ILDLEKDAEIYVIEI-SSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKL---IGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEI--SLKLENHNLSASD-AKINLTS--NAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKA---ILSYKNIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 4ZIY Chain:A ((123-390)) | ----------------------------------------------------------------------------------------------------------------KVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEI----------DYT------------------------------SKIVQPHVAGILNIGTAH---FGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFGAGG---DVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKTPH-LFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGEL---SWQEHHDLGRDLAELPLDHIVAVGQFASAALEGTKLKAFQTQAEALPFLINLIQTHQSMSFLFKGSRFTHMETLMADLMEK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69202 for 1922 contacts (-36.0/contact) +
2D Compatibility (PS) -25700 + (NN) -1373 + (LL) 14396
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -99029.0 ( -51.52 by residue)
QMean score : 0.374
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