Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNTGLTNNDILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFII---CKMLNYSGEDRVKVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAIIAYEKGSPAEQKFWEKCFSLAERNFDQ---ALHYINHHNAIQLSIEKARHYVNMAQNNINTFSDSSYKIALIDFLNASIERQA |
4LOB Chain:A ((35-345)) | ---------------VATDFAAMDHLINEGISS-KVGLVMSVSKHVVEAGGKRMRPIMCLLAARACDLDNMQNAQRL--AAIIEMLHTATLVHDDVVD--------------WNNQTAVLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQEAYR-EPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGEEHAIIRR--SIATGGVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPYRQALINLTRLALHRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153692 for 2410 contacts (-63.8/contact) +
2D Compatibility (PS) -31114 + (NN) -11585 + (LL) 1988
1D Compatibility (HY) -25200 + (ID) 4950
Total energy: -224553.0 ( -93.18 by residue)
QMean score : 0.460
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