Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERST--NLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
2F3T Chain:A ((3-191))
-----QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKM-PHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQ
General information:
TITO was launched using:
RESULT:
Template:
2F3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99976 for 1361 contacts (-73.5/contact) +
2D Compatibility (PS) -21472 + (NN) -16387 + (LL) 668
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -157017.0 ( -115.37 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2F3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3T-query.scw
PDB file :
Tito_Scwrl_2F3T.pdb
: