Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIAIVGLPNAGKSTLFNRILGRKAAVVSNIPGITRDRQEGVGRISDLELKIIDTGG-WNDQTNFFLQIVEQIEFSLF-SADIIFFLVDAKVQ-NEQNKEFAKWLKRRTNKSVILIANKCES---YKSENIDYLQFFDFIGPVYISAEHNLGMVDLYNALAGVIDSSTNFSSVIPKPLPVIKVAGTGIQEKNEQISTLHAENQSNQPNRLRVAIIGRPNVGKSTFLNSLLSENRLITSSEPGTTRDSVDITYNHNGKLITLIDTAGIRRRANLIDNLELKFVK-KSMESIKRSHVVVLMLDSLLGIKQQDLSIGEAAIKGGKGIIIVLNKWDLINKDDRSRLIKFVRQQEITRLFLE-------VPTVTISALKGIRCSDVIDKCLEVNEFLNKKISTAKVNKWLVDALGRHPHPFVKGRAIRMKYIAQIGTKPPAFSLTCNVPEGVDESYKRYLTNDLRKNFF-IDGIPVRLLLKKNKNPYVK |
1MKY Chain:A ((4-439)) | ---VLIVGRPNVGKSTLFNKLVK--------------DPVQDTVEWYGKTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFL-RKSTVDTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINL-------------DTMLETIIKK-----------LEEKG-----LDLESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIP------VDDEVFIDGRKYVFVDTAGL-----------EKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREK-------RYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAYASYTTKVPSSAINSALQKVLAFTNLP----RGLKIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219722 for 3110 contacts (-70.7/contact) +
2D Compatibility (PS) -42767 + (NN) -14742 + (LL) 5208
1D Compatibility (HY) -28800 + (ID) 6350
Total energy: -307173.0 ( -98.77 by residue)
QMean score : 0.538
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