Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNLGIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKLDVDWCITTPDFIAKI-TPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYFKSVFLNSTMGKAYKMSKVEDII
1AD2 Chain:A ((33-225))
------------------ATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGW-MDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS---
General information:
TITO was launched using:
RESULT:
Template:
1AD2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107915 for 1435 contacts (-75.2/contact) +
2D Compatibility (PS) -21202 + (NN) -14837 + (LL) 1632
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -161572.0 ( -112.59 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_1AD2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AD2-query.scw
PDB file :
Tito_Scwrl_1AD2.pdb
: