Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDTVLVLQDGKCFLGKSIGKKGKCIGEICFTTGITGYQHTITDPSFADQIIMFTFPHVGNVGINDKDNEGKKIFASGVIMRELSP-ASHPSSYVSLSDWLEKSNLVGISGVDTRALTRHLRKHGPQNGIICPLIHSNVTTVCNTCTYDDQAILVIKGLLDELKKHKPVNGIEITDRVSLNNNF----------------KSDLNAKYKVAVVDFGIKASIVSRLIELDCAIELIKPDRGFAQKILSMCPDGIVLSNGPGDPQEIGKSVTPEIDVIVKSKIPILGICMGHQLLAITLGAKTIKMNVGHRGSNHPVYNVSSDKVEITSQNHGFVFDPSSLPNNVEVTHISMFDNSIEGIMAKDYPVFSVQYHPEEAPGTHDSHYLFRRFIDNIALYKVKSA |
| 1C30 Chain:B ((2-378)) | IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNG-------------CIIAGDNPDAALA----LEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIV-PAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIT-AIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177992 for 3362 contacts (-52.9/contact) +
2D Compatibility (PS) -39764 + (NN) -20458 + (LL) 1580
1D Compatibility (HY) -26400 + (ID) 7750
Total energy: -270784.0 ( -80.54 by residue)
QMean score : 0.526
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