Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASAIRFLSIDAVQKASSGHPGMPLGMADVATVLFAQYLNHNPDDPKWVNRDRFVLSNGHGSMLLYSILYLTGY-ISIDELKNFRQLTSKTPGHPEFGLTPGVEATTGPLGQGFAVAVGMALAESILKNQFG------INHYTYVMLGDGCLMEGISHEAASLAGHLKLNKLIALFDDNDISIDGATHLSCSDDAEKRFSAYGWNVNK-IDGHDFNSISLAIEQARK-SDKPTLICCKTIIGKFS-NRAGASSAHSGAFTEEDVKQMREKLNWNYVPFHVPKDVKNAW-METVERAKQNYNSVSFQRQALE-PSENKELQRRLDKRLPDNIDDDLANLKKQIHETMPNEATRSSFGKVMELLTESMPELIGGSADLTGSNCTKYKHMKVIDNNNYSGSYVHYGVREHAMAACMNGMALHGGILPYGGTFLVFSDYCRPAIRLSALMKQQVIYVMTHDSIGVGEDGPTHQPIEHLASLRTVPNLYVFRPTDAIETLECISIALKKKESPALFALSRQNLGYMRKFHFNVDQSTNLSKSGAYVVCEYSEKLEVTIFATGSEVEIAIETRKKLQEKGIGTRVVSMPCWRLFDEQSDEYKDAILNND-SIKVAIEAGSEIGWHKYIGSNGIFIGMKSFGESAPYKTLYEHFNINTDYVVKCVCEKLFISKP |
| 2R8P Chain:A ((7-663)) | LANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAI-NEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTE---EQLANIAR-GGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -355591 for 6069 contacts (-58.6/contact) +
2D Compatibility (PS) -70465 + (NN) -36534 + (LL) 372
1D Compatibility (HY) -48000 + (ID) 15950
Total energy: -526168.0 ( -86.70 by residue)
QMean score : 0.547
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