Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSNFGTKFSAEDFFRDFCPTVDGEVKKERFEQELLALKEETEKRKKLELSTLKGEKAEKKKKLEQELLTLKKRELYRQYVSLATMIPFALLMAIELKKICSDQILLVVISVGLGHTLLPFSVLSLICMLYLIYNNRKIIQKERELENIENGREIEKKKYNCPDIDQCLAYIEVISTVLVIVGQIMDEVSPLKVAEEALFFTASILSFAIAFYNYKKENKENKERETEKLSHAEELSKNNSNIPMAGLMLAGSSVMLIRRVMLITLASSLSPALGLAAIALLIVGSGLITHSYKRELKNVKVSGKSITGASVIDIVDRDSIHICTNM |
1IJD Chain:A ((11-34)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVPPAFGLPLMLGAVAITALLVHAAVLTHTTWYAAFLQ--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3861 for 90 contacts (-42.9/contact) +
2D Compatibility (PS) -2511 + (NN) -1313 + (LL) 25304
1D Compatibility (HY) 0 + (ID) 200
Total energy: 17419.0 ( 193.54 by residue)
QMean score : -0.021
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