Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNV---KFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
3GX8 Chain:A ((9-110))
------IEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNKEFIGGCDVITSMARSGELADLLEEAQALV
General information:
TITO was launched using:
RESULT:
Template:
3GX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70154 for 743 contacts (-94.4/contact) +
2D Compatibility (PS) -10457 + (NN) -3108 + (LL) 456
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -97363.0 ( -131.04 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_3GX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GX8-query.scw
PDB file :
Tito_Scwrl_3GX8.pdb
: