Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYP-VITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFYNVNKISD---FQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQL-----ERSRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 2Q0K Chain:A ((3-282)) | ---DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITG---SSEIENYPGVKEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGG---SPKRTGIKGESEYWGKGV--STCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPIT---LEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204703 for 2161 contacts (-94.7/contact) +
2D Compatibility (PS) -30053 + (NN) -16468 + (LL) 2980
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -267694.0 ( -123.88 by residue)
QMean score : 0.527
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