Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVI-ACGAMSSDLLEKEIIETQKLTNKPFGVNLITMHPN-----LSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDE-RVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVI--EGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
2GJL Chain:A ((9-320)) | ---------TETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNL-TLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGE-HIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGH--PGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPA-----VKAAIR---AADERSTDLIMRSLRNTARVARNAISQ---EVLAIEARGGA----GYADIAALVSGQ-RGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -226132 for 2695 contacts (-83.9/contact) +
2D Compatibility (PS) -31973 + (NN) -8161 + (LL) 2624
1D Compatibility (HY) -11200 + (ID) 4700
Total energy: -279542.0 ( -103.73 by residue)
QMean score : 0.545
|
|
|